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Species belonging to selected taxon:

Drosophila auraria



ABOUT THIS RECORD

ID: MNEST009234
species: Drosophila auraria
miRNA family: miR-4048
source: miRNEST

Taxonomy by NCBI:
Drosophila auraria montium subgroup melanogaster group Sophophora Drosophila Drosophiliti Drosophilina Drosophilini Drosophilinae Drosophilidae Ephydroidea Acalyptratae Schizophora Cyclorrhapha Eremoneura Muscomorpha Brachycera Diptera Endopterygota Neoptera Pterygota Dicondylia Insecta Hexapoda Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
GCACATTGGTCAGCATTATTT

miRNA*
AAGATGCTCTTGGATGGCCA

mismatches: 5
bulges: 1

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pre-miRNA
TTAAAGTTAGAGAAGATGCTCTTGGATGGCCATTGAAAACTTGTGATAGTTTCGCTCATTCCATTGCACATTGGTCAGCATTATTTCCAGCGCCT

dot-bracket secondary structure
.....(((.((((.((((((....((((((.((.(((.....((((.....))))...))).)).)).))))....)))))).)))).)))....


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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